Biology · BIO-008
Mitosis in Onion Root Tips
Count dividing cells in a root tip. How long does each phase take?
- NGSS HS-LS1-4
- AP Biology Unit 4
- AP Biology Investigation 7
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About this lab
Count cell-cycle stages in root-tip fields and compare a treated root with a control. This interactive 3D experiment lets high school students pick the region and sample, examine chromosome appearance, and classify the cells within the microscope's counting frame. Stage tallies provide proportions and a mitotic index, with a cycle-time calculation presented under the sampling assumptions. The treated-control comparison supplies a chi-square analysis using the recorded categories. A single-cell view follows chromosome motion, changing DNA content, and checkpoints, keeping the animated process available beside the microscope evidence. The investigation is aligned with NGSS HS-LS1-4, AP Biology Unit 4, and AP Biology Investigation 7.
The question behind the experiment
A root tip contains cells in different developmental regions, so where you count matters. This investigation connects root growth to cell division and uses chromosome appearance to classify cell-cycle stages. Begin with the meristematic region behind the root cap rather than assuming that every cell along the root is dividing equally. Cells farther from that region can elongate and differentiate. The visible organization of the root therefore provides context for interpreting a count of dividing cells in the selected microscopic sample.
Plan a useful comparison
Define a consistent counting region and classify each cell using the course's stage criteria. Distinguish interphase, prophase, metaphase, anaphase, and telophase by their represented chromosome appearance and organization. Do not classify a cell by its location alone after selecting the appropriate root region. Retain ambiguous observations rather than silently assigning them to the most common category. A repeat count or another field can help assess whether the stage proportions depend heavily on a small or difficult sample.
Connect the observation to the model
Calculate the mitotic index as the fraction of counted cells assigned to mitotic stages. Keep the total denominator explicit, including interphase cells in the appropriate sample. A count of mitotic cells by itself cannot compare samples of different total sizes. Examine how the proportions change under the course's selected treatment conditions. A larger mitotic fraction can reflect changed time spent in mitosis or a changed cycling population, so it is not automatically a complete measurement of root growth rate.
Interpret the result carefully
Use stage proportions to estimate relative stage durations only under the stated steady-population assumptions. A snapshot can represent time fractions when cells progress through the cycle and are distributed appropriately across stages. Synchronization, arrest, or biased sampling can break that inference. Explain the assumption before multiplying a stage fraction by a reference cycle duration. The course's full-precision population expectation and your finite sampled count answer different questions; a sample is not required to contain exactly the expectation for every category.
Build an explanation from your evidence
Connect chromosome behavior to division outcome. Sister chromatids separate during mitosis, and cytokinesis partitions the daughter cells. The course contrasts a plant cell plate with the cleavage-furrow representation in animal cells. Keep chromosome separation distinct from the physical division of the cytoplasm, even when both occur close together in a sequence. A final explanation should connect the counted stages, the sample region, and the time-inference assumptions instead of treating a labeled stage diagram as sufficient evidence for the entire root's growth pattern.
A reference case from this course
For the specified control at 25 °C, the model cycle duration is 809 min and the mitotic stages total 137 min. The population reference mitotic index is 0.169345. These are model expectations; a finite microscope count can differ. Retain the sampling region and sample size when comparing your estimated index with the reference.
Keep the investigation reproducible
Before changing the setup, write a prediction that names the measured quantity and the expected direction of change. Retain the original trial as a reference. Record the apparatus conditions, units, and whether you used Ideal or Real lab mode. If the selected activity includes seeded variation, keep the seed and run identity with the result so another comparison does not silently mix different conditions.
Separate the observation from its explanation. A reading or a counted object belongs in the evidence; the relationship you use to interpret it belongs in the reasoning. When a result differs from the reference case, check the settings and measurement procedure before deciding that the model relationship has failed. Describe a specific source of uncertainty and where it enters your calculation. Finish with a claim supported by the recorded comparison, and identify an additional trial that could distinguish your explanation from an alternative.
Continue the comparison
Practice scale and specimen handling in Virtual Microscopy, then compare chromosome outcomes in Meiosis & Crossing Over. Separate the number of dividing cells from the chromosome count inside each cell.
Common questions
Standards alignment
- NGSS HS-LS1-4
- AP Biology Unit 4
- AP Biology Investigation 7


